KAN27743 | GDV

Marker Overview

Marker Overview


Name	KAN27743
Genbank ID	N/A
Type	SSR
Species	Vaccinium sp.
Primer 1	KAN27743.Forward: ATTTACCCAAGGCCCAAAAA
Primer 2	KAN27743.Reverse: TGTTCCTCGAGTTAATGGGG
Publication	[view all]
Contact	Brandon Schlautman

Contact

Name

Details

Brandon Schlautman

First name:	Brandon
Last name:	Schlautman
Institution:	Department of Horticulture, University of Wisconsin-Madison
Address:	Department of Horticulture, University of Wisconsin-Madison, 1575 Linden Dr. Madison, WI 53706, USA
Country:	USA
Email:	schlautman@wisc.edu
Last update:	Apr 2017

Publications


Year	Publication
2018	Schlautman B, Diaz-Garcia L, Covarrubias-Pazaran G, Schlautman N, Vorsa N, Polashock J, Ogden E, Brown A, Lin Y, Bassil N, Buck E, Wiedow C, McCallum S, Graham J, Iorizzo M, Rowland L, Zalapa J. Comparative genetic mapping reveals synteny and collinearity between the American cranberry and diploid blueberry genomes. Molecular breeding. 2018; 38(1):9.

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	Blueberry-F1#10_x_W85-23-F1-2017	LG05	N/A	0.8	KAN-27743	View
2	Blueberry-F1#10-2017	LG05	N/A	0	KAN-27743	View
3	Blueberry-W85-23-2017	LG05	N/A	0	KAN-27743	View

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Vcev1_p0.Chr09	supercontig	Vcev1_p0.Chr09:54210557..54210787 .
VaccDscaff17	supercontig	VaccDscaff17:36065195..36065407 .
scaffold00041	supercontig	scaffold00041:126510..126746 .
chr9_H1	supercontig	chr9_H1:44515524..44515754 .
Vmac_chr05	supercontig	Vmac_chr05:36380903..36381142 .
scaffold00237	supercontig	scaffold00237:367691..367930 .
Chr09	supercontig	Chr09:312267..312509 .
Chr09_Vaccinium_vitis-idaea_var_RedCandy_RedCandy_UBC_v1	chromosome	Chr09_Vaccinium_vitis-idaea_var_RedCandy_RedCandy_UBC_v1:391459..391651 .
Chr09_Vaccinium_vitis-idaea_ssp_minus	chromosome	Chr09_Vaccinium_vitis-idaea_ssp_minus:374472..374660 .