KAN27743

Marker Overview
NameKAN27743
Genbank IDN/A
TypeSSR
SpeciesVaccinium sp.
Primer 1KAN27743.Forward: ATTTACCCAAGGCCCAAAAA
Primer 2KAN27743.Reverse: TGTTCCTCGAGTTAATGGGG
Publication[view all]
ContactBrandon Schlautman
Contact
NameDetails
Brandon Schlautman
First name:Brandon
Last name:Schlautman
Institution:Department of Horticulture, University of Wisconsin-Madison
Address:Department of Horticulture, University of Wisconsin-Madison, 1575 Linden Dr. Madison, WI 53706, USA
Country:USA
Email:schlautman@wisc.edu
Last update:Apr 2017
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Vcev1_p0.Chr09supercontigVcev1_p0.Chr09:54210557..54210787 .Vaccinium caesariense clone W85-20 P0 v2.0 genome sequenceGDV marker alignment to genome using primer sequences
VaccDscaff17supercontigVaccDscaff17:36065195..36065407 .Vaccinium corymbosum cv. Draper v1.0 genome sequenceGDV marker alignment to genome using primer sequences
scaffold00041supercontigscaffold00041:126510..126746 .Vaccinium corymbosum W8520 draft genome sequenceGDV marker alignment to genome using primer sequences
chr9_H1supercontigchr9_H1:44515524..44515754 .Vaccinium darrowii clone NJ8810/NJ8807 v1.2 genome sequenceGDV marker alignment to genome using primer sequences
Vmac_chr05supercontigVmac_chr05:36380903..36381142 .Vaccinium macrocarpon cv. Ben Lear v1.0 genome sequenceGDV marker alignment to genome using primer sequences
scaffold00237supercontigscaffold00237:367691..367930 .Vaccinium macrocarpon cv. Stevens v1.0 genome sequenceGDV marker alignment to genome using primer sequences
Chr09supercontigChr09:312267..312509 .Vaccinium myrtillus isolate NK2018 v1.0 genome sequenceGDV marker alignment to genome using primer sequences
Chr09_Vaccinium_vitis-idaea_var_RedCandy_RedCandy_UBC_v1chromosomeChr09_Vaccinium_vitis-idaea_var_RedCandy_RedCandy_UBC_v1:391459..391651 .Vaccinium vitis-idaea ssp. vitis-idaea cv. Red Candy v1.0 genomeGDV marker alignment to genome using primer sequences
Chr09_Vaccinium_vitis-idaea_ssp_minuschromosomeChr09_Vaccinium_vitis-idaea_ssp_minus:374472..374660 .Vaccinium vitis-idaea ssp. minus v1.0 genomeGDV marker alignment to genome using primer sequences
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Blueberry-F1#10_x_W85-23-F1-2017LG05N/A0.8KAN-27743View
2Blueberry-F1#10-2017LG05N/A0KAN-27743View
3Blueberry-W85-23-2017LG05N/A0KAN-27743View