Cranberry-CNJ02-1-2007

Map Overview


Name	Cranberry-CNJ02-1-2007
Species	Vaccinium macrocarpon
Software	JoinMap v4.1
Map type	genetic
Map unit	cM
Maternal parent	Mullica Queen
Paternal parent	Crimson Queen
Population size	221
Number of loci	540
Number of QTL	14
Number of linkage groups	12
Publication	[view all]
Contact	Juan Zalapa

Stock

Name

Type

Details

CNJ02-1

population

Description:	full-sib breeding population
Origin detail:	USA
Population size:	221

Contact

Name

Details

Juan Zalapa

First name:	Juan
Last name:	Zalapa
Institution:	Vegetable Crops Research Unit, Department of Horticulture
Address:	University of Wisconsin, USDA-ARS, Madison, WI, USA
Country:	USA
Email:	jezalapa@wisc.edu
Last update:	Aug 2018

Publication


Year	Publications
2015	Schlautman B, Covarrubias-Pazaran G,. Diaz-Garcia LA,Johnson-Cicalese J, Iorrizo M, Rodriguez-Bonilla L,Bougie T, Bougie T, Wiesman E, Steffan S, Polashock J, Vorsa N, Zalapa J. Development of a high-density cranberry SSR linkage map for comparative genetic analysis and trait detection. Molecular Breeding. 2015; 35(177).

Map Loci

This map contains 540 marker loci:

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Linkage Group	Marker Name	Locus Name	Type	Position
Cranberry-CNJ02-1-2007.LG7	76326_K70	76326_K70	marker_locus	46.9 cM
Cranberry-CNJ02-1-2007.LG7	SCF34513	SCF34513	marker_locus	46.9 cM
Cranberry-CNJ02-1-2007.LG7	1trimcontig217158	1trimcontig217158	marker_locus	52.21 cM
Cranberry-CNJ02-1-2007.LG7	80734_K70	80734_K70	marker_locus	55.66 cM
Cranberry-CNJ02-1-2007.LG7	SCF94237	SCF94237	marker_locus	55.66 cM
Cranberry-CNJ02-1-2007.LG7	ct145906	ct145906	marker_locus	55.67 cM
Cranberry-CNJ02-1-2007.LG7	SCF111145	SCF111145	marker_locus	60.8 cM
Cranberry-CNJ02-1-2007.LG7	SCF112540	SCF112540	marker_locus	61.33 cM
Cranberry-CNJ02-1-2007.LG7	SCF184873	SCF184873	marker_locus	61.67 cM
Cranberry-CNJ02-1-2007.LG7	SCF116864	SCF116864	marker_locus	63.43 cM
Cranberry-CNJ02-1-2007.LG7	SCF85946	SCF85946	marker_locus	65.1 cM
Cranberry-CNJ02-1-2007.LG7	SCF25221	SCF25221	marker_locus	67.78 cM
Cranberry-CNJ02-1-2007.LG7	scf31h	scf31h	marker_locus	69.52 cM
Cranberry-CNJ02-1-2007.LG7	SCF89247	SCF89247	marker_locus	71.8 cM
Cranberry-CNJ02-1-2007.LG7	scf137c	scf137c	marker_locus	73.44 cM
Cranberry-CNJ02-1-2007.LG7	SCF7155	SCF7155	marker_locus	73.8 cM
Cranberry-CNJ02-1-2007.LG7	SCF20681	SCF20681	marker_locus	76.07 cM
Cranberry-CNJ02-1-2007.LG7	SCF36745	SCF36745	marker_locus	78.88 cM
Cranberry-CNJ02-1-2007.LG7	6ms4e4b	6ms4e4b	marker_locus	79.62 cM
Cranberry-CNJ02-1-2007.LG7	1trimcontig435620	1trimcontig435620	marker_locus	82.65 cM
Cranberry-CNJ02-1-2007.LG7	SCF25944	SCF25944	marker_locus	83.94 cM
Cranberry-CNJ02-1-2007.LG7	SCF2483	SCF2483	marker_locus	86.16 cM
Cranberry-CNJ02-1-2007.LG7	SCF56717	SCF56717	marker_locus	90.71 cM
Cranberry-CNJ02-1-2007.LG7	scf2s	scf2s	marker_locus	95.34 cM
Cranberry-CNJ02-1-2007.LG7	scf1594	scf1594	marker_locus	98.83 cM

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Map QTL

This map contains 14 QTL:

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Linkage Group	Name	Type	Start	Stop	Peak
Cranberry-CNJ02-1-2007.LG10	qFWT.CNJ02-1.LG10.2011	QTL	-	-	48.52 cM
Cranberry-CNJ02-1-2007.LG10	qFWT.CNJ02-1.LG10.2012	QTL	-	-	57.64 cM
Cranberry-CNJ02-1-2007.LG11	qBBI.CNJ02-1.LG11	QTL	-	-	24.18 cM
Cranberry-CNJ02-1-2007.LG11	qFWT.CNJ02-1.LG11.1	QTL	-	-	12.75 cM
Cranberry-CNJ02-1-2007.LG11	qFWT.CNJ02-1.LG11.2011.1	QTL	-	-	41.89 cM
Cranberry-CNJ02-1-2007.LG11	qFWT.CNJ02-1.LG11.2011.2	QTL	-	-	82.26 cM
Cranberry-CNJ02-1-2007.LG11	qFWT.CNJ02-1.LG11.2012	QTL	-	-	12.75 cM
Cranberry-CNJ02-1-2007.LG11	qFYLD.CNJ02-01.LG11	QTL	-	-	24.18 cM
Cranberry-CNJ02-1-2007.LG11	qFYLD.CNJ02-01.LG11.2012	QTL	-	-	24.18 cM
Cranberry-CNJ02-1-2007.LG4	qFYLD.CNJ02-01.LG4	QTL	-	-	88.99 cM
Cranberry-CNJ02-1-2007.LG6	qFWT.CNJ02-1.LG6	QTL	-	-	17.54 cM
Cranberry-CNJ02-1-2007.LG6	qFYLD.CNJ02-01.LG6	QTL	-	-	56.8 cM
Cranberry-CNJ02-1-2007.LG10	qFWT.CNJ02-1.LG10	QTL	-	-	48.52 cM
Cranberry-CNJ02-1-2007.LG11	qFWT.CNJ02-1.LG11.2	QTL	-	-	82.26 cM

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