Cranberry-CNJ02-1-2007

Map Overview


Name	Cranberry-CNJ02-1-2007
Species	Vaccinium macrocarpon
Software	JoinMap v4.1
Map type	genetic
Map unit	cM
Maternal parent	Mullica Queen
Paternal parent	Crimson Queen
Population size	221
Number of loci	540
Number of QTL	14
Number of linkage groups	12
Publication	[view all]
Contact	Juan Zalapa

Stock

Name

Type

Details

CNJ02-1

population

Description:	full-sib breeding population
Origin detail:	USA
Population size:	221

Contact

Name

Details

Juan Zalapa

First name:	Juan
Last name:	Zalapa
Institution:	Vegetable Crops Research Unit, Department of Horticulture
Address:	University of Wisconsin, USDA-ARS, Madison, WI, USA
Country:	USA
Email:	jezalapa@wisc.edu
Last update:	Aug 2018

Publication


Year	Publications
2015	Schlautman B, Covarrubias-Pazaran G,. Diaz-Garcia LA,Johnson-Cicalese J, Iorrizo M, Rodriguez-Bonilla L,Bougie T, Bougie T, Wiesman E, Steffan S, Polashock J, Vorsa N, Zalapa J. Development of a high-density cranberry SSR linkage map for comparative genetic analysis and trait detection. Molecular Breeding. 2015; 35(177).

Map Loci

This map contains 540 marker loci:

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Linkage Group	Marker Name	Locus Name	Type	Position
Cranberry-CNJ02-1-2007.LG6	SCF9909	SCF9909	marker_locus	47.69 cM
Cranberry-CNJ02-1-2007.LG6	412234_K63	412234_K63	marker_locus	48.42 cM
Cranberry-CNJ02-1-2007.LG6	SCF139334	SCF139334	marker_locus	50.87 cM
Cranberry-CNJ02-1-2007.LG6	scf112c	scf112c	marker_locus	53.02 cM
Cranberry-CNJ02-1-2007.LG6	vm53000	vm53000	marker_locus	53.91 cM
Cranberry-CNJ02-1-2007.LG6	1trimcontig344502	1trimcontig344502	marker_locus	56.8 cM
Cranberry-CNJ02-1-2007.LG6	ct188529	ct188529	marker_locus	64.28 cM
Cranberry-CNJ02-1-2007.LG6	SCF13711	SCF13711	marker_locus	72.99 cM
Cranberry-CNJ02-1-2007.LG6	Ig13662a	Ig13662a	marker_locus	81.56 cM
Cranberry-CNJ02-1-2007.LG6	scf207d	scf207d	marker_locus	82.03 cM
Cranberry-CNJ02-1-2007.LG6	scf283b	scf283b	marker_locus	84.39 cM
Cranberry-CNJ02-1-2007.LG6	SCF147117	SCF147117	marker_locus	85.13 cM
Cranberry-CNJ02-1-2007.LG6	ct92708	ct92708	marker_locus	89.94 cM
Cranberry-CNJ02-1-2007.LG6	SCF113558	SCF113558	marker_locus	91.44 cM
Cranberry-CNJ02-1-2007.LG6	SCF124927	SCF124927	marker_locus	96.87 cM
Cranberry-CNJ02-1-2007.LG6	vm31701	vm31701	marker_locus	97.09 cM
Cranberry-CNJ02-1-2007.LG6	SCF109269	SCF109269	marker_locus	98.19 cM
Cranberry-CNJ02-1-2007.LG6	SCF108454	SCF108454	marker_locus	99.09 cM
Cranberry-CNJ02-1-2007.LG6	SCF79620	SCF79620	marker_locus	99.12 cM
Cranberry-CNJ02-1-2007.LG6	SCF192219	SCF192219	marker_locus	99.64 cM
Cranberry-CNJ02-1-2007.LG6	1trimcontig339726	1trimcontig339726	marker_locus	99.87 cM
Cranberry-CNJ02-1-2007.LG7	scf203h	scf203h	marker_locus	0 cM
Cranberry-CNJ02-1-2007.LG7	1trimcontig450309	1trimcontig450309	marker_locus	1.11 cM
Cranberry-CNJ02-1-2007.LG7	SCF10514	SCF10514	marker_locus	2.4 cM
Cranberry-CNJ02-1-2007.LG7	SCF155637	SCF155637	marker_locus	3.56 cM

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Map QTL

This map contains 14 QTL:

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Linkage Group	Name	Type	Start	Stop	Peak
Cranberry-CNJ02-1-2007.LG10	qFWT.CNJ02-1.LG10.2011	QTL	-	-	48.52 cM
Cranberry-CNJ02-1-2007.LG10	qFWT.CNJ02-1.LG10.2012	QTL	-	-	57.64 cM
Cranberry-CNJ02-1-2007.LG11	qBBI.CNJ02-1.LG11	QTL	-	-	24.18 cM
Cranberry-CNJ02-1-2007.LG11	qFWT.CNJ02-1.LG11.1	QTL	-	-	12.75 cM
Cranberry-CNJ02-1-2007.LG11	qFWT.CNJ02-1.LG11.2011.1	QTL	-	-	41.89 cM
Cranberry-CNJ02-1-2007.LG11	qFWT.CNJ02-1.LG11.2011.2	QTL	-	-	82.26 cM
Cranberry-CNJ02-1-2007.LG11	qFWT.CNJ02-1.LG11.2012	QTL	-	-	12.75 cM
Cranberry-CNJ02-1-2007.LG11	qFYLD.CNJ02-01.LG11	QTL	-	-	24.18 cM
Cranberry-CNJ02-1-2007.LG11	qFYLD.CNJ02-01.LG11.2012	QTL	-	-	24.18 cM
Cranberry-CNJ02-1-2007.LG4	qFYLD.CNJ02-01.LG4	QTL	-	-	88.99 cM
Cranberry-CNJ02-1-2007.LG6	qFWT.CNJ02-1.LG6	QTL	-	-	17.54 cM
Cranberry-CNJ02-1-2007.LG6	qFYLD.CNJ02-01.LG6	QTL	-	-	56.8 cM
Cranberry-CNJ02-1-2007.LG10	qFWT.CNJ02-1.LG10	QTL	-	-	48.52 cM
Cranberry-CNJ02-1-2007.LG11	qFWT.CNJ02-1.LG11.2	QTL	-	-	82.26 cM

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